Chitinimonas naiadis sp. Nov., isolated from a freshwater river

Shalem Raj Padakandla; Jong Chan Chae

doi:10.4014/jmb.1703.03075

Chitinimonas naiadis sp. Nov., isolated from a freshwater river

Shalem Raj Padakandla
, Jong Chan Chae^*

^*Corresponding author for this work

Bioresource and Biomolecule Engineering

Jeonbuk National University

Research output: Contribution to journal › Journal article › peer-review

3 Scopus citations

Abstract

A rod shaped, aerobic, Gram-stain-negative, and motile bacterium, strain AR2^T, was isolated from a water sample of Yeongsan river, Republic of Korea. Strain AR2^T clustered closely with the members of the genus Chitinimonas and showed the highest 16S rRNA gene sequence similarity with Chitinimonas prasina LY03^T (96.4%), Chitinimonas viridis HMD2169^T (96.4%), Chitinimonas taiwanensis cfT (96.2%), and Chitinimonas koreensis R2A43-10^T (94.2%). The predominant fatty acids of strain AR2T were identified to be summed feature 3 (comprising C_16:1ω7c and/or C_16:1ω6c), C_16:0, and C_10:03-OH. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were found to be the major polar lipids. The genomic DNA G+C content was 60.4 mol%. Based on the polyphasic characterization, the isolated strain AR2^T is described as a representative of a novel species in the genus Chitinimonas, for which the name Chitinimonas naiadis sp. nov. (type strain =AR2^T =KCTC 42755^T =JCM 31504^T) is proposed.

Original language	English
Pages (from-to)	1300-1305
Number of pages	6
Journal	Journal of Microbiology and Biotechnology
Volume	27
Issue number	7
DOIs	https://doi.org/10.4014/jmb.1703.03075
State	Published - 2017.07.28

Keywords

Chitinimonas
Polyphasic taxonomy

Quacquarelli Symonds(QS) Subject Topics

Biological Sciences

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10.4014/jmb.1703.03075

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title = "Chitinimonas naiadis sp. Nov., isolated from a freshwater river",

abstract = "A rod shaped, aerobic, Gram-stain-negative, and motile bacterium, strain AR2T, was isolated from a water sample of Yeongsan river, Republic of Korea. Strain AR2T clustered closely with the members of the genus Chitinimonas and showed the highest 16S rRNA gene sequence similarity with Chitinimonas prasina LY03T (96.4\%), Chitinimonas viridis HMD2169T (96.4\%), Chitinimonas taiwanensis cfT (96.2\%), and Chitinimonas koreensis R2A43-10T (94.2\%). The predominant fatty acids of strain AR2T were identified to be summed feature 3 (comprising C16:1ω7c and/or C16:1ω6c), C16:0, and C10:03-OH. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were found to be the major polar lipids. The genomic DNA G+C content was 60.4 mol\%. Based on the polyphasic characterization, the isolated strain AR2T is described as a representative of a novel species in the genus Chitinimonas, for which the name Chitinimonas naiadis sp. nov. (type strain =AR2T =KCTC 42755T =JCM 31504T) is proposed.",

keywords = "Chitinimonas, Polyphasic taxonomy",

author = "Padakandla, \{Shalem Raj\} and Chae, \{Jong Chan\}",

note = "Publisher Copyright: {\textcopyright} 2017 by The Korean Society for Microbiology and Biotechnology.",

year = "2017",

month = jul,

day = "28",

doi = "10.4014/jmb.1703.03075",

language = "English",

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journal = "Journal of Microbiology and Biotechnology",

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TY - JOUR

T1 - Chitinimonas naiadis sp. Nov., isolated from a freshwater river

AU - Padakandla, Shalem Raj

AU - Chae, Jong Chan

PY - 2017/7/28

Y1 - 2017/7/28

N2 - A rod shaped, aerobic, Gram-stain-negative, and motile bacterium, strain AR2T, was isolated from a water sample of Yeongsan river, Republic of Korea. Strain AR2T clustered closely with the members of the genus Chitinimonas and showed the highest 16S rRNA gene sequence similarity with Chitinimonas prasina LY03T (96.4%), Chitinimonas viridis HMD2169T (96.4%), Chitinimonas taiwanensis cfT (96.2%), and Chitinimonas koreensis R2A43-10T (94.2%). The predominant fatty acids of strain AR2T were identified to be summed feature 3 (comprising C16:1ω7c and/or C16:1ω6c), C16:0, and C10:03-OH. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were found to be the major polar lipids. The genomic DNA G+C content was 60.4 mol%. Based on the polyphasic characterization, the isolated strain AR2T is described as a representative of a novel species in the genus Chitinimonas, for which the name Chitinimonas naiadis sp. nov. (type strain =AR2T =KCTC 42755T =JCM 31504T) is proposed.

AB - A rod shaped, aerobic, Gram-stain-negative, and motile bacterium, strain AR2T, was isolated from a water sample of Yeongsan river, Republic of Korea. Strain AR2T clustered closely with the members of the genus Chitinimonas and showed the highest 16S rRNA gene sequence similarity with Chitinimonas prasina LY03T (96.4%), Chitinimonas viridis HMD2169T (96.4%), Chitinimonas taiwanensis cfT (96.2%), and Chitinimonas koreensis R2A43-10T (94.2%). The predominant fatty acids of strain AR2T were identified to be summed feature 3 (comprising C16:1ω7c and/or C16:1ω6c), C16:0, and C10:03-OH. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were found to be the major polar lipids. The genomic DNA G+C content was 60.4 mol%. Based on the polyphasic characterization, the isolated strain AR2T is described as a representative of a novel species in the genus Chitinimonas, for which the name Chitinimonas naiadis sp. nov. (type strain =AR2T =KCTC 42755T =JCM 31504T) is proposed.

KW - Chitinimonas

KW - Polyphasic taxonomy

UR - https://www.scopus.com/pages/publications/85026487172

U2 - 10.4014/jmb.1703.03075

DO - 10.4014/jmb.1703.03075

M3 - Journal article

C2 - 28434214

AN - SCOPUS:85026487172

SN - 1017-7825

VL - 27

SP - 1300

EP - 1305

JO - Journal of Microbiology and Biotechnology

JF - Journal of Microbiology and Biotechnology

IS - 7

ER -

Chitinimonas naiadis sp. Nov., isolated from a freshwater river

Abstract

Keywords

Quacquarelli Symonds(QS) Subject Topics

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