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Cohnella abietis sp. nov., isolated from Korean fir (Abies koreana) rhizospheric soil of Halla mountain

  • Lingmin Jiang
  • , Sophea Pheng
  • , Keun Chul Lee
  • , Se Won Kang
  • , Jae Cheol Jeong
  • , Cha Young Kim
  • , Hyeong Cheol Park
  • , Dae Hyuk Kim
  • , Suk Weon Kim
  • , Song Gun Kim*
  • , Jiyoung Lee
  • *Corresponding author for this work
  • Korea Research Institute of Bioscience and Biotechnology
  • Jeonbuk National University
  • University of Science and Technology UST
  • Bureau of Ecological Research

Research output: Contribution to journalJournal articlepeer-review

Abstract

A strictly aerobic, motile, endospore-forming, rod-shaped bacterium, designated HS21T, was isolated from rhizospheric soil of the Korean fir tree (Abies koreana) from Halla mountain on Jeju island, Korea. Growth of strain HS21T was observed at pH 6.0–8.0 (optimum: pH 7.0), 0–2% (w/v) NaCl and 4–30°C (optimum: 25°C). A comparative analysis of 16S rRNA gene sequences showed that strain HS21T was most closely related to Cohnella luojiensis HY-22RT (97.6%), followed by C. lupini RLAHU4BT (97.4%) and C. collisoli NKM-5T (97.2%). The genome of strain HS21T comprised a circular chromosome of 7,059,027 bp with 44.8% G + C content. The DNA-DNA relatedness values between strain HS21T and C. luojiensis HY-22RT and C. lupini RLAHU4BT were 18.1% and 13.8%, respectively. The major cellular fatty acids (> 5%) of the isolate were anteiso-C15:0, iso-C16:0, C16:0, and iso-C15:0. The polar lipids present were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, lysylphosphatidylglycerol, and three unidentified aminophospholipids. Based on its phenotypic, phylogenetic, genomic, and chemotaxonomic properties, strain HS21T represents a novel species of the genus Cohnella, for which the name Cohnella abietis sp. nov. is proposed. The type strain is HS21T (= KCTC 43028T = CCTCC AB 2019010T).

Original languageEnglish
Pages (from-to)953-958
Number of pages6
JournalJournal of Microbiology
Volume57
Issue number11
DOIs
StatePublished - 2019.11.1

Keywords

  • Cohnella abietis
  • genome
  • Korea fir
  • taxonomy

Quacquarelli Symonds(QS) Subject Topics

  • Biological Sciences

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