Complete genome sequence analysis of a novel Staphylococcus phage StAP1 and proposal of a new species in the genus Silviavirus

Amal Senevirathne; Kuntal Ghosh; Eunjung Roh; Kwang Pyo Kim

doi:10.1007/s00705-017-3316-2

Complete genome sequence analysis of a novel Staphylococcus phage StAP1 and proposal of a new species in the genus Silviavirus

Amal Senevirathne
, Kuntal Ghosh
, Eunjung Roh
, Kwang Pyo Kim^*

^*Corresponding author for this work

Department of Food Science and Technology

Jeonbuk National University
Rural Development Administration

Research output: Contribution to journal › Journal article › peer-review

5 Scopus citations

Abstract

Bacteriophage StAP1 was isolated from a soil sample infecting Staphylococcus aureus and S. xylosus. Its genome was found to be 135,502 base pairs (bp) long with 30.00 mol% G+C content and 192 open reading frames. While no tRNA encoding genes were identified, 7 mobile elements were found to interrupt five StAP1 open reading frames. Comparative genomic and proteomic analysis consistently supports the establishment of a new species in the genus Silviavirus.

Original language	English
Pages (from-to)	2145-2148
Number of pages	4
Journal	Archives of Virology
Volume	162
Issue number	7
DOIs	https://doi.org/10.1007/s00705-017-3316-2
State	Published - 2017.07.1

Quacquarelli Symonds(QS) Subject Topics

Biological Sciences

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10.1007/s00705-017-3316-2

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title = "Complete genome sequence analysis of a novel Staphylococcus phage StAP1 and proposal of a new species in the genus Silviavirus",

abstract = "Bacteriophage StAP1 was isolated from a soil sample infecting Staphylococcus aureus and S. xylosus. Its genome was found to be 135,502 base pairs (bp) long with 30.00 mol\% G+C content and 192 open reading frames. While no tRNA encoding genes were identified, 7 mobile elements were found to interrupt five StAP1 open reading frames. Comparative genomic and proteomic analysis consistently supports the establishment of a new species in the genus Silviavirus.",

author = "Amal Senevirathne and Kuntal Ghosh and Eunjung Roh and Kim, \{Kwang Pyo\}",

note = "Publisher Copyright: {\textcopyright} 2017, Springer-Verlag Wien.",

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AU - Senevirathne, Amal

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AU - Roh, Eunjung

AU - Kim, Kwang Pyo

PY - 2017/7/1

Y1 - 2017/7/1

N2 - Bacteriophage StAP1 was isolated from a soil sample infecting Staphylococcus aureus and S. xylosus. Its genome was found to be 135,502 base pairs (bp) long with 30.00 mol% G+C content and 192 open reading frames. While no tRNA encoding genes were identified, 7 mobile elements were found to interrupt five StAP1 open reading frames. Comparative genomic and proteomic analysis consistently supports the establishment of a new species in the genus Silviavirus.

AB - Bacteriophage StAP1 was isolated from a soil sample infecting Staphylococcus aureus and S. xylosus. Its genome was found to be 135,502 base pairs (bp) long with 30.00 mol% G+C content and 192 open reading frames. While no tRNA encoding genes were identified, 7 mobile elements were found to interrupt five StAP1 open reading frames. Comparative genomic and proteomic analysis consistently supports the establishment of a new species in the genus Silviavirus.

UR - https://www.scopus.com/pages/publications/85015727401

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DO - 10.1007/s00705-017-3316-2

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ER -

Complete genome sequence analysis of a novel Staphylococcus phage StAP1 and proposal of a new species in the genus Silviavirus

Abstract

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