Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil

Lingmin Jiang; Se Won Kang; Song Gun Kim; Jae CheolJeong; Cha Young Kim; Dae Hyuk Kim; Suk Weon Kim; Jiyoung Lee

doi:10.7845/KJM.2019.9028

Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil

Lingmin Jiang
, Se Won Kang
, Song Gun Kim
, Jae CheolJeong
, Cha Young Kim
, Dae Hyuk Kim
, Suk Weon Kim
, Jiyoung Lee^*

^*Corresponding author for this work

Department of Molecular Biology

Research output: Contribution to journal › Journal article › peer-review

Abstract

The genus Cohnella, which belongs to the family Paenibacillaceae, inhabits a wide range of environmental niches. Here, we report the complete genome sequence of Cohnella sp. HS21, which was isolated from the rhizospheric soil of Korean fir (Abies koreana) on the top of Halla Mountain in the Republic of Korea. Strain HS21 features a 7,059,027 bp circular chromosome with 44.8% GC-content. Its genome contains 5,939 protein-coding genes, 78 transfer RNA (tRNA) genes, 27 ribosomal RNA (rRNA) genes, 4 noncoding RNA genes (ncRNA), and 90 pseudogenes. The bacterium contains antibiotic-related gene clusters and genes encoding plant cell wall-degrading enzymes.

Original language	English
Pages (from-to)	171-173
Number of pages	3
Journal	Korean Journal of Microbiology
Volume	55
Issue number	2
DOIs	https://doi.org/10.7845/KJM.2019.9028
State	Published - 2019.06

Keywords

complete genome sequence
Korean fir
rhizospheric bacteria

Quacquarelli Symonds(QS) Subject Topics

Biological Sciences

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10.7845/KJM.2019.9028

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title = "Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil",

abstract = "The genus Cohnella, which belongs to the family Paenibacillaceae, inhabits a wide range of environmental niches. Here, we report the complete genome sequence of Cohnella sp. HS21, which was isolated from the rhizospheric soil of Korean fir (Abies koreana) on the top of Halla Mountain in the Republic of Korea. Strain HS21 features a 7,059,027 bp circular chromosome with 44.8\% GC-content. Its genome contains 5,939 protein-coding genes, 78 transfer RNA (tRNA) genes, 27 ribosomal RNA (rRNA) genes, 4 noncoding RNA genes (ncRNA), and 90 pseudogenes. The bacterium contains antibiotic-related gene clusters and genes encoding plant cell wall-degrading enzymes.",

keywords = "complete genome sequence, Korean fir, rhizospheric bacteria",

author = "Lingmin Jiang and Kang, \{Se Won\} and Kim, \{Song Gun\} and Jae CheolJeong and Kim, \{Cha Young\} and Kim, \{Dae Hyuk\} and Kim, \{Suk Weon\} and Jiyoung Lee",

note = "Publisher Copyright: {\textcopyright} 2019. The Microbiological Society of Korea",

year = "2019",

month = jun,

doi = "10.7845/KJM.2019.9028",

language = "English",

volume = "55",

pages = "171--173",

journal = "Korean Journal of Microbiology",

issn = "0440-2413",

number = "2",

}

TY - JOUR

T1 - Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil

AU - Jiang, Lingmin

AU - Kang, Se Won

AU - Kim, Song Gun

AU - CheolJeong, Jae

AU - Kim, Cha Young

AU - Kim, Dae Hyuk

AU - Kim, Suk Weon

AU - Lee, Jiyoung

PY - 2019/6

Y1 - 2019/6

N2 - The genus Cohnella, which belongs to the family Paenibacillaceae, inhabits a wide range of environmental niches. Here, we report the complete genome sequence of Cohnella sp. HS21, which was isolated from the rhizospheric soil of Korean fir (Abies koreana) on the top of Halla Mountain in the Republic of Korea. Strain HS21 features a 7,059,027 bp circular chromosome with 44.8% GC-content. Its genome contains 5,939 protein-coding genes, 78 transfer RNA (tRNA) genes, 27 ribosomal RNA (rRNA) genes, 4 noncoding RNA genes (ncRNA), and 90 pseudogenes. The bacterium contains antibiotic-related gene clusters and genes encoding plant cell wall-degrading enzymes.

AB - The genus Cohnella, which belongs to the family Paenibacillaceae, inhabits a wide range of environmental niches. Here, we report the complete genome sequence of Cohnella sp. HS21, which was isolated from the rhizospheric soil of Korean fir (Abies koreana) on the top of Halla Mountain in the Republic of Korea. Strain HS21 features a 7,059,027 bp circular chromosome with 44.8% GC-content. Its genome contains 5,939 protein-coding genes, 78 transfer RNA (tRNA) genes, 27 ribosomal RNA (rRNA) genes, 4 noncoding RNA genes (ncRNA), and 90 pseudogenes. The bacterium contains antibiotic-related gene clusters and genes encoding plant cell wall-degrading enzymes.

KW - complete genome sequence

KW - Korean fir

KW - rhizospheric bacteria

UR - https://www.scopus.com/pages/publications/85122447707

U2 - 10.7845/KJM.2019.9028

DO - 10.7845/KJM.2019.9028

M3 - Journal article

AN - SCOPUS:85122447707

SN - 0440-2413

VL - 55

SP - 171

EP - 173

JO - Korean Journal of Microbiology

JF - Korean Journal of Microbiology

IS - 2

ER -

Complete genome sequence of Cohnella sp. HS21 isolated from Korean fir (Abies koreana) rhizospheric soil

Abstract

Keywords

Quacquarelli Symonds(QS) Subject Topics

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