De novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome

Yeonhwa Jo; Hoseong Choi; Ju Yeon Yoon; Seung Kook Choi; Won Kyong Cho

doi:10.1128/genomeA.00496-15

De novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome

Yeonhwa Jo
, Hoseong Choi
, Ju Yeon Yoon
, Seung Kook Choi
, Won Kyong Cho^*

^*Corresponding author for this work

Department of Bioenvironmental Chemistry

Seoul National University
United States Food and Drug Administration

Research output: Contribution to journal › Journal article › peer-review

7 Scopus citations

Abstract

Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.

Original language	English
Article number	e00496-15
Journal	Genome Announcements
Volume	3
Issue number	3
DOIs	https://doi.org/10.1128/genomeA.00496-15
State	Published - 2015

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@article{5074b8dc100d45019fd4e9f8be8eee98,

title = "De novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome",

abstract = "Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.",

author = "Yeonhwa Jo and Hoseong Choi and Yoon, \{Ju Yeon\} and Choi, \{Seung Kook\} and Cho, \{Won Kyong\}",

note = "Publisher Copyright: {\textcopyright} 2015 Jo et al.",

year = "2015",

doi = "10.1128/genomeA.00496-15",

language = "English",

volume = "3",

journal = "Genome Announcements",

issn = "2169-8287",

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TY - JOUR

T1 - De novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome

AU - Jo, Yeonhwa

AU - Choi, Hoseong

AU - Yoon, Ju Yeon

AU - Choi, Seung Kook

AU - Cho, Won Kyong

PY - 2015

Y1 - 2015

N2 - Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.

AB - Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.

UR - https://www.scopus.com/pages/publications/84981263538

U2 - 10.1128/genomeA.00496-15

DO - 10.1128/genomeA.00496-15

M3 - Journal article

AN - SCOPUS:84981263538

SN - 2169-8287

VL - 3

JO - Genome Announcements

JF - Genome Announcements

IS - 3

M1 - e00496-15

ER -

De novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome

Abstract

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